CICCOLELLA SIMONE

Juyal, A., Tayebi, Z., Zelikovsky, A., Soto Gomez, M., Ciccolella, S., Della Vedova, G., et al. (2025). Plastic: An Easy to Use and Modular Tool for Benchmarking Tumor Phylogeny Reconstruction Pipelines. In Computational Advances in Bio and Medical Sciences
12th International Conference, ICCABS 2023, Norman, OK, USA, December 11–13, 2023, Revised Selected Papers (pp.82-93). Springer Science and Business Media Deutschland GmbH [10.1007/978-3-031-82768-6_8]. Dettaglio

Ciccolella, S., Denti, L., Avila Cartes, J., Della Vedova, G., Pirola, Y., Rizzi, R., et al. (2025). Differential analysis of alternative splicing events in gene regions using residual neural networks. NEURAL COMPUTING & APPLICATIONS, 37(9), 6819-6829 [10.1007/s00521-025-10992-2]. Dettaglio

Cozzi, D., Riccardi, B., Denti, L., Ciccolella, S., Sadakane, K., Bonizzoni, P. (2025). Pangenome Graph Indexing via the Multidollar-BWT. In Leibniz International Proceedings in Informatics, LIPIcs. Schloss Dagstuhl- Leibniz-Zentrum fur Informatik GmbH, Dagstuhl Publishing [10.4230/LIPIcs.SEA.2025.13]. Dettaglio

Ciccolella, S., Patterson, M., Hajirasouliha, I., Della Vedova, G. (2025). Cancer progression inference using a finite-state model to allow recurrences and losses of mutations. NEURAL COMPUTING & APPLICATIONS, 37(26), 21545-21562 [10.1007/s00521-025-11474-1]. Dettaglio

Avila Cartes, J., Bonizzoni, P., Ciccolella, S., Della Vedova, G., Denti, L. (2024). PangeBlocks: customized construction of pangenome graphs via maximal blocks. BMC BIOINFORMATICS, 25(1) [10.1186/s12859-024-05958-5]. Dettaglio