CICCOLELLA SIMONE
Pubblicazioni
Juyal, A., Tayebi, Z., Zelikovsky, A., Soto Gomez, M., Ciccolella, S., Della Vedova, G., et al. (2025). Plastic: An Easy to Use and Modular Tool for Benchmarking Tumor Phylogeny Reconstruction Pipelines. In Computational Advances in Bio and Medical Sciences
12th International Conference, ICCABS 2023, Norman, OK, USA, December 11–13, 2023, Revised Selected Papers (pp.82-93). Springer Science and Business Media Deutschland GmbH [10.1007/978-3-031-82768-6_8]. DettaglioCiccolella, S., Denti, L., Avila Cartes, J., Della Vedova, G., Pirola, Y., Rizzi, R., et al. (2025). Differential analysis of alternative splicing events in gene regions using residual neural networks. NEURAL COMPUTING & APPLICATIONS, 37(9), 6819-6829 [10.1007/s00521-025-10992-2]. Dettaglio
Avila Cartes, J., Bonizzoni, P., Ciccolella, S., Della Vedova, G., Denti, L., Didelot, X., et al. (2024). RecGraph: recombination-aware alignment of sequences to variation graphs. BIOINFORMATICS, 40(5) [10.1093/bioinformatics/btae292]. Dettaglio
Ciccolella, S., Cozzi, D., Della Vedova, G., Kuria, S., Bonizzoni, P., Denti, L. (2024). Differential quantification of alternative splicing events on spliced pangenome graphs. PLOS COMPUTATIONAL BIOLOGY, 20(12) [10.1371/journal.pcbi.1012665]. Dettaglio
Avila Cartes, J., Bonizzoni, P., Ciccolella, S., Della Vedova, G., Denti, L. (2024). PangeBlocks: customized construction of pangenome graphs via maximal blocks. BMC BIOINFORMATICS, 25(1) [10.1186/s12859-024-05958-5]. Dettaglio